Search | VHL CLAP/WR-PAHO/WHO

1.

Global RNA interactome of Salmonella discovers a 5' UTR sponge for the MicF small RNA that connects membrane permeability to transport capacity.

Matera, Gianluca; Altuvia, Yael; Gerovac, Milan; El Mouali, Youssef; Margalit, Hanah; Vogel, Jörg.

Mol Cell ; 82(3): 629-644.e4, 2022 02 03.

Article in English | MEDLINE | ID: mdl-35063132

2.

Global Mapping of Small RNA-Target Interactions in Bacteria.

Melamed, Sahar; Peer, Asaf; Faigenbaum-Romm, Raya; Gatt, Yair E; Reiss, Niv; Bar, Amir; Altuvia, Yael; Argaman, Liron; Margalit, Hanah.

Mol Cell ; 63(5): 884-97, 2016 09 01.

Article in English | MEDLINE | ID: mdl-27588604

3.

In vivo cleavage rules and target repertoire of RNase III in Escherichia coli.

Altuvia, Yael; Bar, Amir; Reiss, Niv; Karavani, Ehud; Argaman, Liron; Margalit, Hanah.

Nucleic Acids Res ; 46(19): 10380-10394, 2018 11 02.

Article in English | MEDLINE | ID: mdl-30113670

4.

A defense-offense multi-layered regulatory switch in a pathogenic bacterium.

Nitzan, Mor; Fechter, Pierre; Peer, Asaf; Altuvia, Yael; Bronesky, Delphine; Vandenesch, François; Romby, Pascale; Biham, Ofer; Margalit, Hanah.

Nucleic Acids Res ; 43(3): 1357-69, 2015 Feb 18.

Article in English | MEDLINE | ID: mdl-25628364

5.

In vivo cleavage rules and target repertoire of RNase III in Escherichia coli.

Altuvia, Yael; Bar, Amir; Reiss, Niv; Karavani, Ehud; Argaman, Liron; Margalit, Hanah.

Nucleic Acids Res ; 46(19): 10530-10531, 2018 11 02.

Article in English | MEDLINE | ID: mdl-30184218

6.

Interactions between distant ceRNAs in regulatory networks.

Nitzan, Mor; Steiman-Shimony, Avital; Altuvia, Yael; Biham, Ofer; Margalit, Hanah.

Biophys J ; 106(10): 2254-66, 2014 May 20.

Article in English | MEDLINE | ID: mdl-24853754

7.

A genome-wide view of the expression and processing patterns of Thermus thermophilus HB8 CRISPR RNAs.

Juranek, Stefan; Eban, Tali; Altuvia, Yael; Brown, Miguel; Morozov, Pavel; Tuschl, Thomas; Margalit, Hanah.

RNA ; 18(4): 783-94, 2012 Apr.

Article in English | MEDLINE | ID: mdl-22355165

8.

In vivo mapping of RNA-RNA interactions in Staphylococcus aureus using the endoribonuclease III.

Lioliou, Efthimia; Sharma, Cynthia M; Altuvia, Yaël; Caldelari, Isabelle; Romilly, Cédric; Helfer, Anne-Catherine; Margalit, Hanah; Romby, Pascale.

Methods ; 63(2): 135-43, 2013 Sep 15.

Article in English | MEDLINE | ID: mdl-23851283

9.

RepTar: a database of predicted cellular targets of host and viral miRNAs.

Elefant, Naama; Berger, Amnon; Shein, Harel; Hofree, Matan; Margalit, Hanah; Altuvia, Yael.

Nucleic Acids Res ; 39(Database issue): D188-94, 2011 Jan.

Article in English | MEDLINE | ID: mdl-21149264

10.

A wide repertoire of miRNA binding sites: prediction and functional implications.

Elefant, Naama; Altuvia, Yael; Margalit, Hanah.

Bioinformatics ; 27(22): 3093-101, 2011 Nov 15.

Article in English | MEDLINE | ID: mdl-21953484

11.

Cytomegalovirus microRNAs facilitate persistent virus infection in salivary glands.

Dölken, Lars; Krmpotic, Astrid; Kothe, Sheila; Tuddenham, Lee; Tanguy, Mélanie; Marcinowski, Lisa; Ruzsics, Zsolt; Elefant, Naama; Altuvia, Yael; Margalit, Hanah; Koszinowski, Ulrich H; Jonjic, Stipan; Pfeffer, Sébastien.

PLoS Pathog ; 6(10): e1001150, 2010 Oct 14.

Article in English | MEDLINE | ID: mdl-20976200

12.

Prediction of Novel Bacterial Small RNAs From RIL-Seq RNA-RNA Interaction Data.

Bar, Amir; Argaman, Liron; Altuvia, Yael; Margalit, Hanah.

Front Microbiol ; 12: 635070, 2021.

Article in English | MEDLINE | ID: mdl-34093460

13.

The impact of Hfq-mediated sRNA-mRNA interactome on the virulence of enteropathogenic Escherichia coli.

Pearl Mizrahi, Sivan; Elbaz, Netanel; Argaman, Liron; Altuvia, Yael; Katsowich, Naama; Socol, Yaakov; Bar, Amir; Rosenshine, Ilan; Margalit, Hanah.

Sci Adv ; 7(44): eabi8228, 2021 Oct 29.

Article in English | MEDLINE | ID: mdl-34705501

14.

Mapping the small RNA interactome in bacteria using RIL-seq.

Melamed, Sahar; Faigenbaum-Romm, Raya; Peer, Asaf; Reiss, Niv; Shechter, Omer; Bar, Amir; Altuvia, Yael; Argaman, Liron; Margalit, Hanah.

Nat Protoc ; 13(1): 1-33, 2018 Jan.

Article in English | MEDLINE | ID: mdl-29215635

15.

A melanoma multiepitope polypeptide induces specific CD8+ T-cell response.

Levy, Adva; Pitcovski, Jacob; Frankenburg, Shoshana; Elias, Orit; Altuvia, Yael; Margalit, Hanna; Peretz, Tamar; Golenser, Jacob; Lotem, Michal.

Cell Immunol ; 250(1-2): 24-30, 2007.

Article in English | MEDLINE | ID: mdl-18275944

16.

Clustering and conservation patterns of human microRNAs.

Altuvia, Yael; Landgraf, Pablo; Lithwick, Gila; Elefant, Naama; Pfeffer, Sébastien; Aravin, Alexei; Brownstein, Michael J; Tuschl, Thomas; Margalit, Hanah.

Nucleic Acids Res ; 33(8): 2697-706, 2005.

Article in English | MEDLINE | ID: mdl-15891114

17.

Insights from MHC-bound peptides.

Margalit, Hanah; Altuvia, Yael.

Novartis Found Symp ; 254: 77-90; discussion 91-101, 216-22, 250-2, 2003.

Article in English | MEDLINE | ID: mdl-14712933

18.

Host immune system gene targeting by a viral miRNA.

Stern-Ginossar, Noam; Elefant, Naama; Zimmermann, Albert; Wolf, Dana G; Saleh, Nivin; Biton, Moshe; Horwitz, Elad; Prokocimer, Zafnat; Prichard, Mark; Hahn, Gabriele; Goldman-Wohl, Debra; Greenfield, Caryn; Yagel, Simcha; Hengel, Hartmut; Altuvia, Yael; Margalit, Hanah; Mandelboim, Ofer.

Science ; 317(5836): 376-81, 2007 Jul 20.

Article in English | MEDLINE | ID: mdl-17641203

19.

Characterization and prediction of protein-protein interactions within and between complexes.

Sprinzak, Einat; Altuvia, Yael; Margalit, Hanah.

Proc Natl Acad Sci U S A ; 103(40): 14718-23, 2006 Oct 03.

Article in English | MEDLINE | ID: mdl-17003128

20.

Evolutionary conservation of domain-domain interactions.

Itzhaki, Zohar; Akiva, Eyal; Altuvia, Yael; Margalit, Hanah.

Genome Biol ; 7(12): R125, 2006.

Article in English | MEDLINE | ID: mdl-17184549

VHL CLAP/WR-PAHO/WHO

Latin-American Center for Perinatology, Woman and Reproductive Health

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Global RNA interactome of Salmonella discovers a 5' UTR sponge for the MicF small RNA that connects membrane permeability to transport capacity.

Global Mapping of Small RNA-Target Interactions in Bacteria.

In vivo cleavage rules and target repertoire of RNase III in Escherichia coli.

A defense-offense multi-layered regulatory switch in a pathogenic bacterium.

In vivo cleavage rules and target repertoire of RNase III in Escherichia coli.

Interactions between distant ceRNAs in regulatory networks.

A genome-wide view of the expression and processing patterns of Thermus thermophilus HB8 CRISPR RNAs.

In vivo mapping of RNA-RNA interactions in Staphylococcus aureus using the endoribonuclease III.

RepTar: a database of predicted cellular targets of host and viral miRNAs.

A wide repertoire of miRNA binding sites: prediction and functional implications.

Cytomegalovirus microRNAs facilitate persistent virus infection in salivary glands.

Prediction of Novel Bacterial Small RNAs From RIL-Seq RNA-RNA Interaction Data.

The impact of Hfq-mediated sRNA-mRNA interactome on the virulence of enteropathogenic Escherichia coli.

Mapping the small RNA interactome in bacteria using RIL-seq.

A melanoma multiepitope polypeptide induces specific CD8+ T-cell response.

Clustering and conservation patterns of human microRNAs.

Insights from MHC-bound peptides.

Host immune system gene targeting by a viral miRNA.

Characterization and prediction of protein-protein interactions within and between complexes.

Evolutionary conservation of domain-domain interactions.